Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898539.1_cds_XP_016448588.1_43225
CDS Infomation

[gene=LOC107773687] [db_xref=GeneID:107773687] [protein=IQ domain-containing protein IQM3-like] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016448588.1] [location=complement(join(807..1298,1899..2000,2748..2840,2949..3095,3366..3453,3855..3943,4058..>4123))] [gbkey=CDS]
Sequence

GTTGGTAAAGGTCTGTCCAAAGATGCGGAAGCTCAGATATTGGCCTTTCAACACTGGATT
GAGGCGATTGATCCACGCCACCGGTATGGGCATAACCTGCATATCTATTATGAAGAATGG
TGTAATACTGATGCTGGTCAGCCCTTCTTCTTTTGGTTGGATCTTGGAGATGGCAGAAAG
GTTGATATCAAAGAATGTCCAAGAGCTAAGCTTCAGAAACAATGTATCAAGTATCTTGGA
CCTCAAGAGAGAGAACATTATGAGTACATAATTGCCGGAGGGCAAATACTGCATAAGCTA
ACCGGAATTCTTCTTGACACAACTAAAGGGCCGCCAGGGGCAAAATGGATCTTTGTGATG
AGCACCTCAAAAAGACTCTTTGCTGGTGAAAAGAAGAAAGGAATGTTTCACCATTCCAGC
TTTCTGGCTGGGGGGGCTACTTTAGCTGCTGGACGACTAGTGGTTGAGGATGGGACTGTG
AAGTCTATTTCACCTTACAGTGGACATTATCGGCCGACGGATGATAGCCTTGACAGTTTT
TTATCAATTCTAAAGGAAAATGGAGTAAAAGTGGATGAAGTTAAGATAAAAAAGGCAAAT
GAAGACTATGACAACTCTGAAGATGTAAAATCCATTGAAAATCGTCCATCTAAACTTTCA
ACTCCATCAGACTCTCCTCCTCAAGCTGTTAAGGAAGAGGAGAAAGACTGTTCCGCGGAA
TCAATGGGAGCACCGCAAGCTGAAAGTACAAACAGCTACCAAAGAACGCTCTCTGGTGGC
CTTCAGAGCCCAAGAAGAGATGTGCCAAAGACTGCTATACTGCAACGGATCAGTTCCAAG
AAGTCTACAAAATCATATCAACTCGGTCATCAACTCTCCCGGGTGTGGTCAACAGGTGCT
GGTCCAAGAATTGGCTGCATTGCCGATTACCCTGCTGAACTAAGATGGCAGGCTTTGGAA
CTGACTAATATTTCACCTAGACCTTCTCCATCATCGACTCCTAGGCCGTTTGATGCTCTT
TGTTCGCCTACTTGCTCTTCACCTGTTTTTGGCAATGTACTCGTGAAGTCTTCTTGA

Peptide Sequence

PEP ID

XP_016448588.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM3-like [Nicotiana tabacum]
Sequence

MEVETNAGSNFDLNNSQPHPFSYRKLLDKSACELSELHIPDFRSSDMSLEGFGSPVAAAG
VECDSGMVLVPASPAVSENGRREYDIADTAPKSPSNAAKRLQKVYRSYRTRRMLADSAVV
AEELWWQAIDYARLNHSTISFFNYLKPETAASRWNRVGLNASKVGKGLSKDAEAQILAFQ
HWIEAIDPRHRYGHNLHIYYEEWCNTDAGQPFFFWLDLGDGRKVDIKECPRAKLQKQCIK
YLGPQEREHYEYIIAGGQILHKLTGILLDTTKGPPGAKWIFVMSTSKRLFAGEKKKGMFH
HSSFLAGGATLAAGRLVVEDGTVKSISPYSGHYRPTDDSLDSFLSILKENGVKVDEVKIK
KANEDYDNSEDVKSIENRPSKLSTPSDSPPQAVKEEEKDCSAESMGAPQAESTNSYQRTL
SGGLQSPRRDVPKTAILQRISSKKSTKSYQLGHQLSRVWSTGAGPRIGCIADYPAELRWQ
ALELTNISPRPSPSSTPRPFDALCSPTCSSPVFGNVLVKSS

Transcript Sequence

Gene sequence data has not been registered.